Stem-loop dme-mir-4957

Accession

MI0017743

Description

Drosophila melanogaster dme-mir-4957 precursor miRNA

Sequence

42 reads, 27 reads per million, 22 experiments

ucguuguauuuUACGCACUCUGCUGGCAGCGCUgucggcgucgcugCCAGCUGCCAGCAGCGAGCGGuacacuugcaacuaucc
..((((((.....(((.(.(((((((((((..((.((((...)))).))))))))))))).).))).......)))))).....

Structure

---uc      --uuuUA   A U           GC  u    g 
     guugua       CGC C CUGCUGGCAGC  Ug cggc  
     ||||||       ||| | |||||||||||  || |||| u
     caacgu       GCG G GACGACCGUCG  AC gucg  
ccuau      ucacauG   A C           --  C    c 

Annotation confidence Not enough data

Genome context

chrX: 15319954-15320037 [-]

Mature dme-miR-4957-5p

• Accession: MIMAT0020175
• Description: Drosophila melanogaster dme-miR-4957-5p mature miRNA
• Sequence: 12 - UACGCACUCUGCUGGCAGCGCU - 33
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4957-3p

• Accession: MIMAT0020176
• Description: Drosophila melanogaster dme-miR-4957-3p mature miRNA
• Sequence: 47 - CCAGCUGCCAGCAGCGAGCGG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215