miRBase entry: dme-mir-4965

Stem-loop dme-mir-4965


Accession
MI0017751
Description
Drosophila melanogaster dme-mir-4965 precursor miRNA


Sequence

7 reads, 9 reads per million, 5 experiments
cacaaggugaucgauggGAGAUGAGCGCCUGAUGUGAUgaugaaguagaucgaUCACACCACACACUCACUCACCcagguuucaucc
.....(((((....((((.((((((.(..((.(((((((((.......))).)))))).))..).)))).)).))))....))))).

Structure
cacaa     ucga    A  -    C CC  A      -   ga 
     gguga    uggG GA UGAG G  UG UGUGAU gau  a
     |||||    |||| || |||| |  || |||||| |||  g
     cuacu    acCC CU ACUC C  AC ACACUa cua  u
----c     uugg    A  C    A AC  C      g   ga 


Annotation confidence Not enough data
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Genome context
chrX: 16606108-16606194 [+]

Database links

Mature dme-miR-4965-5p

Accession MIMAT0020188
Description Drosophila melanogaster dme-miR-4965-5p mature miRNA
Sequence 18 - GAGAUGAGCGCCUGAUGUGAU - 38
Evidence experimental
Illumina [1]

Mature dme-miR-4965-3p

Accession MIMAT0020189
Description Drosophila melanogaster dme-miR-4965-3p mature miRNA
Sequence 54 - UCACACCACACACUCACUCACC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215