Stem-loop dme-mir-4967

Accession

MI0017753

Description

Drosophila melanogaster dme-mir-4967 precursor miRNA

Literature search

1 open access papers mention dme-mir-4967
(1 sentences)

Sequence

8 reads, 1 reads per million, 6 experiments

cuauagcguugucucuugcgcaaauUGCAUUUUCUCUCUGUUAACauguacacauaauuccugUAACAAAGGGCAUUUGCAAUGUgugagucagcaaaccgcauccg
.....(((((((..((((((((..(((((..(.((((.(((((.((.(...........).))))))).)))).)..)))))))))))))...))))..))).....

Structure

cuaua   --    -cu        aa     UU U    C     A  u uaca 
     gcg  uugu   cuugcgca  uUGCA  U CUCU UGUUA Ca g    c
     |||  ||||   ||||||||  |||||  | |||| ||||| || |    a
     cgc  aacg   gagugUGU  AACGU  A GGGA ACAAU gu c    u
gccua   ca    acu        --     UU C    A     -  c uuaa 

Annotation confidence Not enough data

Genome context

chr2R: 10012093-10012199 [-]

Mature dme-miR-4967-5p

• Accession: MIMAT0020192
• Description: Drosophila melanogaster dme-miR-4967-5p mature miRNA
• Sequence: 26 - UGCAUUUUCUCUCUGUUAAC - 45
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4967-3p

• Accession: MIMAT0020193
• Description: Drosophila melanogaster dme-miR-4967-3p mature miRNA
• Sequence: 64 - UAACAAAGGGCAUUUGCAAUGU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215