Stem-loop dme-mir-4971

Accession

MI0017757

Description

Drosophila melanogaster dme-mir-4971 precursor miRNA

Sequence

39 reads, 20 reads per million, 22 experiments

ucggcccucgacacgguGGAUGAGCUUGUCAGUGGCGGAuccaggagcaauucugccgcuggcgacagaucaucggccacugacaaugcccauucacuguucgaggagauc
.....((((((.((((((((((.(((((((((((((.(((((((..(((....)))..)))).........))).))))))))))).)).)))))))))))))))).....

Structure

ucggc      c          A  -           G   ---------    ga   a 
     ccucga acgguGGAUG GC UUGUCAGUGGC GAu         ccag  gca u
     |||||| |||||||||| || ||||||||||| |||         ||||  |||  
     ggagcu ugucacuuac cg aacagucaccg cua         gguc  cgu u
cuaga      -          c  u           g   cuagacagc    gc   c 

Annotation confidence Not enough data

Genome context

chr2L: 3463290-3463400 [-]

Mature dme-miR-4971-5p

• Accession: MIMAT0020198
• Description: Drosophila melanogaster dme-miR-4971-5p mature miRNA
• Sequence: 18 - GGAUGAGCUUGUCAGUGGCGGA - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215