Stem-loop dme-mir-4982

Accession

MI0017768

Description

Drosophila melanogaster dme-mir-4982 precursor miRNA

Literature search

1 open access papers mention dme-mir-4982
(1 sentences)

Sequence

5 reads, 4 reads per million, 5 experiments

ccaacuuugcuggcauucgguggccaauaAUGCAAUUGCAUGUCCUUGUUgcuguugcaauguugcAGCUGGAAUUGCAAUUGCAUUUcuaguugccgcugcugcugcucgaguggcaa
(((.(((.((.((((..(((((((.(((((((((((((((..(((..(((((............))))).)))..))))))))))))....)))))))))).))))))..))))))...

Structure

---   a   -u  u    uu       c   ----            UG   UU     uguug 
   cca cuu  gc ggca  cgguggc aau    aAUGCAAUUGCA  UCC  GUUgc     c
   ||| |||  || ||||  ||||||| |||    ||||||||||||  |||  |||||      
   ggu gag  cg ucgu  gucgccg uug    UUACGUUAACGU  AGG  CGAcg     a
aac   -   cu  -    -c       -   aucU            UA   -U     uugua 

Annotation confidence Not enough data

Genome context

chr2R: 18720169-18720287 [+]

Mature dme-miR-4982-5p

• Accession: MIMAT0020215
• Description: Drosophila melanogaster dme-miR-4982-5p mature miRNA
• Sequence: 30 - AUGCAAUUGCAUGUCCUUGUU - 50
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4982-3p

• Accession: MIMAT0020216
• Description: Drosophila melanogaster dme-miR-4982-3p mature miRNA
• Sequence: 67 - AGCUGGAAUUGCAAUUGCAUUU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215