Stem-loop dme-mir-4984

Accession

MI0017770

Description

Drosophila melanogaster dme-mir-4984 precursor miRNA

Literature search

1 open access papers mention dme-mir-4984
(1 sentences)

Sequence

121 reads, 6 reads per million, 25 experiments

cuucgcucgaggugugaaaaccuuuuggccAGCGAAUACGCCUCGGAUCCAAUCAcguuucaagaucgaggugAAUUCUUUGACGUAUUCGCUGGccaaaugacacguucgccauguuuugcg
...(((..((.(((((((.....(((((((((((((((((.(..(((.....((((.((........)).))))..)))..).))))))))))))))))).......)))).))).))..)))

Structure

cuu   uc  g   -    --aaccu                 C UC   UCCAA    g  uca 
   cgc  ga gug ugaa       uuuggccAGCGAAUACG C  GGA     UCAc uu   a
   |||  || ||| ||||       ||||||||||||||||| |  |||     |||| ||    
   gcg  uu uac gcuu       aaaccGGUCGCUUAUGC G  UCU     Agug ag   g
---   uu  g   c    gcacagu                 A UU   ---UA    g  cua 

Annotation confidence Not enough data

Genome context

chr2L: 8141540-8141662 [-]

Mature dme-miR-4984-5p

• Accession: MIMAT0020219
• Description: Drosophila melanogaster dme-miR-4984-5p mature miRNA
• Sequence: 31 - AGCGAAUACGCCUCGGAUCCAAUCA - 55
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4984-3p

• Accession: MIMAT0020220
• Description: Drosophila melanogaster dme-miR-4984-3p mature miRNA
• Sequence: 74 - AAUUCUUUGACGUAUUCGCUGG - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215