Stem-loop dme-mir-4985

Accession

MI0017771

Description

Drosophila melanogaster dme-mir-4985 precursor miRNA

Literature search

1 open access papers mention dme-mir-4985
(1 sentences)

Sequence

410 reads, 4 reads per million, 30 experiments

uugggggcgcugcacuggcauugaaaagUGAAUUACAUUGAUCGUGACAUgggaauggaaaaugUCGCCGAGCCAUGUAAAUCGUUuggccuacccgucua
..(((((((((.....)))......((((((.((((((.(.(((((((((...........)))))).))).).)))))).)))))).)))..))).....

Structure

---uu   --   gcugcacuggcauugaa      A      U A   -      ggga 
     ggg  ggc                 aagUGA UUACAU G UCG UGACAU    a
     |||  |||                 |||||| |||||| | ||| ||||||    u
     ccc  ccg                 uUUGCU AAUGUA C AGC GCUgua    g
aucug   au   ----------------g      A      C G   C      aaag 

Annotation confidence High

Genome context

chr2R: 24294231-24294331 [+]

Mature dme-miR-4985-5p

• Accession: MIMAT0020221
• Description: Drosophila melanogaster dme-miR-4985-5p mature miRNA
• Sequence: 29 - UGAAUUACAUUGAUCGUGACAU - 50
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4985-3p

• Accession: MIMAT0020222
• Description: Drosophila melanogaster dme-miR-4985-3p mature miRNA
• Sequence: 65 - UCGCCGAGCCAUGUAAAUCGUU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215