Stem-loop egr-mir-7

Accession

MI0017779

Description

Echinococcus granulosus egr-mir-7 precursor miRNA

Literature search

2 open access papers mention egr-mir-7
(5 sentences)

Sequence

cauugcuuuugUGGAAGACUGGUGAUAUGUUGUaaagcuccccuaccauaCAGCGUAUCGCAGUUUUUCCCUaaaaacauu
...((.(((((.(((((((((.((((((((((((..(........)..))))))))))))))).)))))).))))).))..

Structure

cau  c     U      -   G            aa cuc 
   ug uuuug GGAAGA CUG UGAUAUGUUGUa  g   c
   || ||||| |||||| ||| ||||||||||||  |    
   ac aaaaU CCUUUU GAC GCUAUGCGACau  c   c
-uu  a     C      U   -            ac auc 

Annotation confidence Not enough data

Genome context

APAU02000012.1: 579477-579557 [-]

Mature egr-miR-7-5p

• Accession: MIMAT0020233
• Description: Echinococcus granulosus egr-miR-7-5p mature miRNA
• Sequence: 12 - UGGAAGACUGGUGAUAUGUUGU - 33
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-7-3p

• Accession: MIMAT0037421
• Description: Echinococcus granulosus egr-miR-7-3p mature miRNA
• Sequence: 51 - CAGCGUAUCGCAGUUUUUCCCU - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83