Stem-loop egr-mir-8

Accession

MI0017780

Description

Echinococcus granulosus egr-mir-8 precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

cgaggcauugugGUAGUCUUCCGAGCAGUAUGUggacguuuuaaucgguccaccgccccaacagcuccUAAUACUGUUCGGUUAGGACGCCacaguggcu
..((.(((((((((.((((((((((((((((..(((.(((.....(((....))).......))))))..)))))))))))..)))))))))))))).))

Structure

cg  g         A     --           GU   c   --uuaau   u 
  ag cauugugGU GUCUU  CCGAGCAGUAU  gga guu       cgg c
  || ||||||||| |||||  |||||||||||  ||| |||       |||  
  uc gugacaCCG CAGGA  GGCUUGUCAUA  ccu cga       gcc c
--  g         -     UU           AU   -   caacccc   a 

Annotation confidence Not enough data

Genome context

APAU02000108.1: 64330-64429 [+]

Mature egr-miR-8-3p

• Accession: MIMAT0020234
• Description: Echinococcus granulosus egr-miR-8-3p mature miRNA
• Sequence: 69 - UAAUACUGUUCGGUUAGGACGCC - 91
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-8-5p

• Accession: MIMAT0037422
• Description: Echinococcus granulosus egr-miR-8-5p mature miRNA
• Sequence: 13 - GUAGUCUUCCGAGCAGUAUGU - 33
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83