Stem-loop egr-mir-124a

Accession

MI0017785

Description

Echinococcus granulosus egr-mir-124a precursor miRNA

Literature search

3 open access papers mention egr-mir-124a
(5 sentences)

Sequence

ugucaagcacgugaaaugGCGUUCAACCUCGGAGCCUUUGUCagcgauugaauUAAGGCACGCGGUGAAUGCCAaaugcgaugcucc
.....(((((((....(((((((((.((.((..(((((..(((.....)))...))))).)).)))))))))))...))).))))..

Structure

uguca    -   gaaa         A  U  GA     -UG   g 
     agca cgu    ugGCGUUCA CC CG  GCCUU   UCa c
     |||| |||    ||||||||| || ||  |||||   ||| g
     ucgu gcg    ACCGUAAGU GG GC  CGGAA   agu a
---cc    a   -uaa         -  C  -A     Uua   u 

Annotation confidence Not enough data

Genome context

APAU02000103.1: 18228-18314 [+]

Mature egr-miR-124a-3p

• Accession: MIMAT0020240
• Description: Echinococcus granulosus egr-miR-124a-3p mature miRNA
• Sequence: 54 - UAAGGCACGCGGUGAAUGCCA - 74
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-124a-5p

• Accession: MIMAT0037426
• Description: Echinococcus granulosus egr-miR-124a-5p mature miRNA
• Sequence: 19 - GCGUUCAACCUCGGAGCCUUUGUC - 42
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83