Stem-loop egr-mir-124b

Accession

MI0017786

Description

Echinococcus granulosus egr-mir-124b precursor miRNA

Literature search

5 open access papers mention egr-mir-124b
(7 sentences)

Sequence

94691 reads, 6779.0 reads per million, 13 experiments

gugaauuugGUAUUCUACGCGAUGUCUUGGUacgaguugacacUAAGGCACGCGGUGAAUACCAaggucc
..((.((((((((((..((((.(((((((((..........)))))))))))))..)))))))))).)).

Structure

gu  a          UA    A         acga 
  ga uuugGUAUUC  CGCG UGUCUUGGU    g
  || ||||||||||  |||| |||||||||     
  cu gaACCAUAAG  GCGC ACGGAAUca    u
-c  g          UG    -         cagu 

Annotation confidence High

Genome context

APAU02000030.1: 412342-412411 [-]

Mature egr-miR-124b-5p

• Accession: MIMAT0020241
• Description: Echinococcus granulosus egr-miR-124b-5p mature miRNA
• Sequence: 10 - GUAUUCUACGCGAUGUCUUGGU - 31
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-124b-3p

• Accession: MIMAT0020242
• Description: Echinococcus granulosus egr-miR-124b-3p mature miRNA
• Sequence: 44 - UAAGGCACGCGGUGAAUACCA - 64
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83