Stem-loop egr-mir-125

Accession

MI0017787

Description

Echinococcus granulosus egr-mir-125 precursor miRNA

Literature search

2 open access papers mention egr-mir-125
(4 sentences)

Sequence

caugUCCCUGAGACCCUAGAGUUGUCcggauuuugcgaauccacauuucucacguggCAACUCUAAUGUCCCGGGUUAUgag
((((..((((.(((..((((((((((((((...((.(....).))....)).)).))))))))))..))).)))).))))..

Structure

--    UC    A   CC          -  -  -uuu  c a 
  caug  CCUG GAC  UAGAGUUGUC cg ga    ug g a
  ||||  |||| |||  |||||||||| || ||    || |  
  gUAU  GGGC CUG  AUCUCAACgg gc cu    ac c u
ga    -U    C   UA          u  a  cuuu  a c 

Annotation confidence Not enough data

Genome context

APAU02000012.1: 1320788-1320869 [+]

Mature egr-miR-125-5p

• Accession: MIMAT0020243
• Description: Echinococcus granulosus egr-miR-125-5p mature miRNA
• Sequence: 5 - UCCCUGAGACCCUAGAGUUGUC - 26
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-125-3p

• Accession: MIMAT0037427
• Description: Echinococcus granulosus egr-miR-125-3p mature miRNA
• Sequence: 58 - CAACUCUAAUGUCCCGGGUUAU - 79
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83