Stem-loop egr-mir-4991

Accession

MI0017796

Description

Echinococcus granulosus egr-mir-4991 precursor miRNA

Literature search

2 open access papers mention egr-mir-4991
(2 sentences)

Sequence

6926 reads, 605.0 reads per million, 13 experiments

agugugagagaggauggagagccaUGUUUGUGGGAGUGCUUCGAGAUCCUGGAAUCCAACCUCAUUucuacgc
.((((((((((((.((((...(((..((((.((.....)).))))....)))..)))).)))).)))).))))

Structure

a    -    -    a    gag   --UG    U  G 
 gugu gaga gagg ugga   cca    UUUG GG A
 |||| |||| |||| ||||   |||    |||| || G
 cgca cuUU CUCC ACCU   GGU    GAGC UC U
-    u    A    A    -AA   CCUA    U  G 

Annotation confidence Low

Genome context

APAU02000049.1: 21533-21605 [+]

Mature egr-miR-4991-5p

• Accession: MIMAT0057838
• Description: Echinococcus granulosus egr-miR-4991-5p mature miRNA
• Sequence: 25 - UGUUUGUGGGAGUGCUUCGA - 44
• Evidence: experimental ; cloned [1]

Mature egr-miR-4991-3p

• Accession: MIMAT0020252
• Description: Echinococcus granulosus egr-miR-4991-3p mature miRNA
• Sequence: 45 - GAUCCUGGAAUCCAACCUCAUU - 66
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448