Stem-loop emu-mir-87

Accession

MI0017807

Description

Echinococcus multilocularis emu-mir-87 precursor miRNA

Sequence

CCACCUGUCAUUUUGCUCGAACCagaguuauucuuggcgucauccaucucucgaaggauguuugcuagguugGUGAGCAAAGUUUCAGGUGU
.((((((..(((((((((..(((((.......(((((((.(((((.((....)).)))))..)))))))))))))))))))))..)))))).

Structure

C      UC         GA     aguuauu       -u     a  u 
 CACCUG  AUUUUGCUC  ACCag       cuuggcg  caucc uc c
 ||||||  |||||||||  |||||       |||||||  ||||| ||  
 GUGGAC  UGAAACGAG  UGguu       ggaucgu  guagg ag u
U      UU         --     -------       uu     a  c 

Annotation confidence Not enough data

Genome context

scaffold_007780: 2330314-2330405 [-]

Mature emu-miR-87-3p

• Accession: MIMAT0020264
• Description: Echinococcus multilocularis emu-miR-87-3p mature miRNA
• Sequence: 73 - GUGAGCAAAGUUUCAGGUGU - 92
• Evidence: not_experimental

Mature emu-miR-87-5p

• Accession: MIMAT0037443
• Description: Echinococcus multilocularis emu-miR-87-5p mature miRNA
• Sequence: 1 - CCACCUGUCAUUUUGCUCGAACC - 23
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267