Stem-loop emu-mir-96

Accession

MI0017808

Description

Echinococcus multilocularis emu-mir-96 precursor miRNA

Sequence

AUUGGCACUUUUGGAAUUGUCaccaguguuccccucgacucgacgcuggcgguggugccuuugaggguuugcggugacggucuaaaagugccga
.((((((((((((((.((((((((.(((...(((((((...(.(((((....))))).).)))))))..)))))))))))))))))))))))))

Structure

A              A        a   uuc       cuc a     g 
 UUGGCACUUUUGGA UUGUCacc gug   cccucga   g cgcug c
 |||||||||||||| |||||||| |||   |||||||   | |||||  
 agccgugaaaaucu ggcagugg cgu   gggaguu   c guggu g
-              -        -   -uu       --u c     g 

Annotation confidence Not enough data

Genome context

contig_62142: 412521-412614 [+]

Mature emu-miR-96-5p

• Accession: MIMAT0020265
• Description: Echinococcus multilocularis emu-miR-96-5p mature miRNA
• Sequence: 1 - AUUGGCACUUUUGGAAUUGUC - 21
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267