Stem-loop emu-mir-153

Accession

MI0017812

Description

Echinococcus multilocularis emu-mir-153 precursor miRNA

Sequence

agucguaaAUGCUUACGAGACGUGCACUCcaguuggaaugguugucaaccaccuuguggaUUGCAUAGUCUCAUAAGUGCCAucgacu
(((((.....(((((.((((((((((.((((...((..(((((...)))))))...)))).))))).))))).))))).....)))))

Structure

     uaaAU     C     -     C    guu  aa     g 
agucg     GCUUA GAGAC GUGCA UCca   gg  ugguu  
|||||     ||||| ||||| ||||| ||||   ||  ||||| u
ucagc     UGAAU CUCUG UACGU aggu   cc  accaa  
     uACCG     A     A     U    guu  --     c 

Annotation confidence Not enough data

Genome context

scaffold_007712: 285013-285100 [+]

Mature emu-miR-153-3p

• Accession: MIMAT0020269
• Description: Echinococcus multilocularis emu-miR-153-3p mature miRNA
• Sequence: 61 - UUGCAUAGUCUCAUAAGUGCCA - 82
• Evidence: experimental ; Illumina [2]

Mature emu-miR-153-5p

• Accession: MIMAT0037447
• Description: Echinococcus multilocularis emu-miR-153-5p mature miRNA
• Sequence: 9 - AUGCUUACGAGACGUGCACUC - 29
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267