Stem-loop emu-mir-190

Accession

MI0017813

Description

Echinococcus multilocularis emu-mir-190 precursor miRNA

Sequence

ucgacaaugAGAUAUGUUUGGGUUACUUGGUGCUgugcucuauccucuuacaCCAGUGACCAAACAUAUUCacauuguu
..(((((((.(((((((((((.(((((.((((..................))))))))))))))))))))..)))))))

Structure

uc       -A           G     U    CUgugcuc 
  gacaaug  GAUAUGUUUGG UUACU GGUG        u
  |||||||  ||||||||||| ||||| ||||         
  uuguuac  UUAUACAAACC AGUGA CCac        a
--       aC           -     -    auucuccu 

Annotation confidence Low

Genome context

scaffold_007767: 617222-617300 [+]

Mature emu-miR-190-5p

• Accession: MIMAT0020270
• Description: Echinococcus multilocularis emu-miR-190-5p mature miRNA
• Sequence: 10 - AGAUAUGUUUGGGUUACUUGGUGCU - 34
• Evidence: experimental ; Illumina [2]

Mature emu-miR-190-3p

• Accession: MIMAT0037448
• Description: Echinococcus multilocularis emu-miR-190-3p mature miRNA
• Sequence: 53 - CCAGUGACCAAACAUAUUC - 71
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267