Stem-loop emu-mir-745

Accession

MI0017816

Description

Echinococcus multilocularis emu-mir-745 precursor miRNA

Sequence

ucaguuuuugugCCAGUUCUUAUCGGGUAUAUCAUGccgccauuucaUGCUGCCUGGUAAGAGCUGUGAcaaaaauug
.((((((((((..((((((((((((((((...((((.........)))).))))))))))))))))..))))))))))

Structure

u          gC                UAU    ccg 
 caguuuuugu  CAGUUCUUAUCGGGUA   CAUG   c
 ||||||||||  ||||||||||||||||   ||||   c
 guuaaaaacA  GUCGAGAAUGGUCCGU   GUac   a
-          GU                --C    uuu 

Annotation confidence Not enough data

Genome context

scaffold_007768: 6488246-6488323 [+]

Mature emu-miR-745-3p

• Accession: MIMAT0020273
• Description: Echinococcus multilocularis emu-miR-745-3p mature miRNA
• Sequence: 48 - UGCUGCCUGGUAAGAGCUGUGA - 69
• Evidence: experimental ; Illumina [2]

Mature emu-miR-745-5p

• Accession: MIMAT0037450
• Description: Echinococcus multilocularis emu-miR-745-5p mature miRNA
• Sequence: 13 - CCAGUUCUUAUCGGGUAUAUCAUG - 36
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267