Stem-loop gma-MIR4993

Accession

MI0017859

Description

Glycine max gma-MIR4993 precursor miRNA

Sequence

8252 reads, 75.0 reads per million, 178 experiments

ggcggcgauGAGCGGCGGCGGUGGAGGAUGaucccuuucucuucuuCGAUGGUUCUGCCAUUUGAUGAag
......((((.((((.(((.((.(((((.((........)).))))).)).)))))))))))........

Structure

--ggcggc    A    C   G  G     U  ucc 
        gauG GCGG GGC GU GAGGA Ga   c
        |||| |||| ||| || ||||| ||    
        UUAC CGUC UUG UA Cuucu cu   u
gaAGUAGU    -    -   G  G     u  cuu 

Annotation confidence Low

Genome context

chr1: 26214771-26214840 [-]

Mature gma-miR4993-5p

• Accession: MIMAT0021011
• Description: Glycine max gma-miR4993-5p mature miRNA
• Sequence: 10 - GAGCGGCGGCGGUGGAGGAUG - 30
• Evidence: experimental ; 454 [1]

Mature gma-miR4993-3p

• Accession: MIMAT0054198
• Description: Glycine max gma-miR4993-3p mature miRNA
• Sequence: 47 - CGAUGGUUCUGCCAUUUGAUGA - 68
• Evidence: experimental ; unknown

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506