Stem-loop gma-MIR4994

Accession

MI0017860

Description

Glycine max gma-MIR4994 precursor miRNA

Sequence

GGUUAGCUCAAGGAUCUCACaugauccagguggaauugaucagguggaauccuuggaucaugUGAUAUCCUUGAGCUAAUACAcuaucaug
.((((((((((((((.(((((((((((((..(((.((.((...)).)).)))))))))))))))).))))))))))))))...........

Structure

----------G              C             gu   a  g  c 
           GUUAGCUCAAGGAU UCACaugauccag  gga uu au  
           |||||||||||||| |||||||||||||  ||| || || a
           UAAUCGAGUUCCUA AGUguacuagguu  ccu ag ug  
guacuaucACA              U             --   a  g  g 

Annotation confidence Not enough data

Genome context

chr16: 36093877-36093967 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR4994

Mature gma-miR4994-5p

• Accession: MIMAT0021012
• Description: Glycine max gma-miR4994-5p mature miRNA
• Sequence: 1 - GGUUAGCUCAAGGAUCUCAC - 20
• Evidence: experimental ; 454 [1]

Mature gma-miR4994-3p

• Accession: MIMAT0032119
• Description: Glycine max gma-miR4994-3p mature miRNA
• Sequence: 63 - UGAUAUCCUUGAGCUAAUACA - 83
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153