Stem-loop gma-MIR4997

Accession

MI0017863

Description

Glycine max gma-MIR4997 precursor miRNA

Sequence

311871 reads, 940.0 reads per million, 178 experiments

aagcggggagacaucgcggcagaagaaauccuGAUCGUCAAGCGCGAAGAUGAGGucgaccaugugacacauucucacgucaucacagacaucauaaugaaugauuuucauguuuauauuuaaauuaguuguuauauguuugucauuugaauuugacacuuaauuuguucaaauuuauacuuacauacaacaaauuuaaacagagacaugaaaaucauucauuaugauauccgugaugacgugaggauaugucacauggucgaucCCAUCUUCGCGCCUGACGAUCAgaauuuauucugcugcgaugucuccccgcuucuacuugcucaa
((((((((((((((((((((((((.((((.((((((((((.(((((((((((.((((((((((((((((.((((((((((((((((.((.(((((((((((((((((((((((((...((((((((.(((((...((((..((....(((((((((.((.......))))))))))).))..))))))))).))))))))...))))))))))))))))))))))))).)).)))))))))))))))).)))))))))))))))).))))))))))).)))))))))).)))).))))))))))))))))))))))))............

Structure

------------                        g    c          A           A                c                a  c                         aua        a     uau    uu  cauu         c  uu 
            aagcggggagacaucgcggcagaa aaau cuGAUCGUCA GCGCGAAGAUG GGucgaccaugugaca auucucacgucaucac ga aucauaaugaaugauuuucauguuu   uuuaaauu guugu   augu  gu    ugaauuuga ac  a
            |||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||   |||||||| |||||   ||||  ||    ||||||||| ||  a
            uucgccccucuguagcgucgucuu uuua gACUAGCAGU CGCGCUUCUAC cuagcugguacacugu uaggagugcaguagug cu uaguauuacuuacuaaaaguacaga   aaauuuaa caaca   uaca  ca    auuuaaacu ug  u
aacucguucauc                        a    a          C           C                a                c  a                         gac        a     ---    uu  ---u         -  uu 

Annotation confidence Low

Genome context

Unknown

Mature gma-miR4997-5p

• Accession: MIMAT0021015
• Description: Glycine max gma-miR4997-5p mature miRNA
• Sequence: 33 - GAUCGUCAAGCGCGAAGAUGAGG - 55
• Evidence: experimental ; 454 [1]

Mature gma-miR4997-3p

• Accession: MIMAT0054200
• Description: Glycine max gma-miR4997-3p mature miRNA
• Sequence: 266 - CCAUCUUCGCGCCUGACGAUCA - 287
• Evidence: experimental ; unknown

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506