Stem-loop hsa-mir-5006

Accession

MI0017873

Symbol

HGNC: MIR5006

Description

Homo sapiens hsa-mir-5006 precursor miRNA

Literature search

1 open access papers mention hsa-mir-5006
(1 sentences)

Sequence

70 reads, 7 reads per million, 28 experiments

aaccauuagggggcugugguUUGCCAGGGCAGGAGGUGGAAgggagccccauuuacagugguaacuuccUUUCCCUUUCCAUCCUGGCAGgcuucagagaacuuuaccag
......(((((..(((.((((((((((((..(((((.(((((((((..(((((...)))))....))))))))))))))..)))))))))))).)))....)))))....

Structure

aaccau     --gg   u            CA     U         --cc     u 
      uaggg    cug gguUUGCCAGGG  GGAGG GGAAgggag    ccauu  
      |||||    ||| ||||||||||||  ||||| |||||||||    ||||| a
      auuuc    gac ucgGACGGUCCU  CUUUC CCUUUccuu    gguga  
--gacc     aaga   u            AC     -         caau     c 

Annotation confidence Not enough data

Genome context

chr13: 41568286-41568395 [-]

Disease association

hsa-mir-5006 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-5006-5p

• Accession: MIMAT0021033
• Description: Homo sapiens hsa-miR-5006-5p mature miRNA
• Sequence: 21 - UUGCCAGGGCAGGAGGUGGAA - 41
• Evidence: experimental ; Illumina [2]

Mature hsa-miR-5006-3p

• Accession: MIMAT0021034
• Description: Homo sapiens hsa-miR-5006-3p mature miRNA
• Sequence: 70 - UUUCCCUUUCCAUCCUGGCAG - 90
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21606961
   Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
   "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
   "Leukemia (2011) 25:1389-1399


2. PubMed ID: 21558790
   Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis
   "Hansen TB, Kjems J, Bramsen JB"
   "RNA Biol (2011) 8:378-383