Stem-loop hsa-mir-548ap

Accession

MI0017875

Symbol

HGNC: MIR548AP

Description

Homo sapiens hsa-mir-548ap precursor miRNA

Literature search

57 open access papers mention hsa-mir-548ap
(171 sentences)

Sequence

3288 reads, 107 reads per million, 77 experiments

accaauuccuagguuggugcAAAAGUAAUUGCGGUCUUUgucauuaaaaccaauaacAAAAACCACAAUUACUUUUuacugaccuaaagauuaauu
...((((..((((((((((.(((((((((((.(((.(((((.(((......))).))))).))).)))))))))))))))))))))..))))....

Structure

-acc    cc          c           C   C     c   aa 
    aauu  uagguuggug AAAAGUAAUUG GGU UUUgu auu  a
    ||||  |||||||||| ||||||||||| ||| ||||| |||   
    uuag  auccagucau UUUUCAUUAAC CCA AAAca uaa  a
uuaa    aa          -           A   A     a   cc 

Annotation confidence High

Genome context

chr15: 85825635-85825730 [+]

Mature hsa-miR-548ap-5p

• Accession: MIMAT0021037
• Description: Homo sapiens hsa-miR-548ap-5p mature miRNA
• Sequence: 21 - AAAAGUAAUUGCGGUCUUU - 39
• Evidence: not_experimental

Mature hsa-miR-548ap-3p

• Accession: MIMAT0021038
• Description: Homo sapiens hsa-miR-548ap-3p mature miRNA
• Sequence: 58 - AAAAACCACAAUUACUUUU - 76
• Evidence: not_experimental

References

1. PubMed ID: 21558790
   Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis
   "Hansen TB, Kjems J, Bramsen JB"
   "RNA Biol (2011) 8:378-383