Dead hairpin entry

Stem-loop ath-MIR5015

Accession

MI0017883

Description

Arabidopsis thaliana ath-MIR5015 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention ath-MIR5015
(1 sentences)

Sequence

2063 reads, 14.0 reads per million, 149 experiments

uuguuguuguuguuguuauuauguuuugcuuucguuaauguCAUGUGUUCUGUUGUUGUUGGuguuauguguagucuuccaugugaaauaucACAUAGAAGACUAAACAUAACAUCaacaacaccaaaacacauggcauuaacgaaagcaaauggaagacaauggaauuuuag
.........((((((((.((....(((((((((((((((((((((((((.((.(((((((((((((((((.((((((((.((((((....)))))).)))))))).))))))))))))))))).)).)))))))))))))))))))))))))..)).))))))))........

Structure

uuguuguug        a  augu                         C  U                 g        c      a 
         uuguuguu uu    uuugcuuucguuaauguCAUGUGUU UG UGUUGUUGGuguuaugu uagucuuc auguga a
         |||||||| ||    ||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||  
         gguaacag ag    aaacgaaagcaauuacgguacacaa ac acaacaaCUACAAUACA AUCAGAAG UACAcu u
-gauuuuaa        a  --gu                         a  c                 A        A      a