gacaccaaagauagggauauuaaacgaauggaauuaguauauggauguaauauaaugaaa CA ---UG --- aaa
uAGAGC CUUU GGUUCC CUAUg u
|||||| |||| |||||| |||||
AUUUUG GAAG CCGagg gauac g
---------------------------------acuugagcuucaaaggaagcauugagC AA UGUCA aaa gga