Stem-loop gma-MIR5032

Accession

MI0017903

Description

Glycine max gma-MIR5032 precursor miRNA

Sequence

gacaccaaagauagggauauuaaacgaauggaauuaguauauggauguaauauaaugaaauAGAGCCACUUUUGGGUUCCCUAUgaaaugaggcauagaaaggagccacugugaagaaguuuuacgaguuacgaaggaaacuucgaguuca
.((((((....(((...((((.....))))...))).....))).)))............((((((..((((..(((((((((((........)))))...)))))).....))))..)))))).(((((.(((((....)))))))))).

Structure

gacaccaaagauagggauauuaaacgaauggaauuaguauauggauguaauauaaugaaa      CA    ---UG      ---     aaa 
                                                            uAGAGC  CUUU     GGUUCC   CUAUg   u
                                                            ||||||  ||||     ||||||   |||||    
                                                            auuuug  gaag     ccgagg   gauac   g
---------------------------------acuugagcuucaaaggaagcauugagc      aa    uguca      aaa     gga 

Annotation confidence Not enough data

Genome context

chr2: 35292552-35292702 [-]

Mature gma-miR5032

• Accession: MIMAT0021052
• Description: Glycine max gma-miR5032 mature miRNA
• Sequence: 62 - AGAGCCACUUUUGGGUUCCCUAU - 84
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21751852
   Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome
   "Radwan O, Liu Y, Clough SJ"
   "Mol Plant Microbe Interact (2011) 24:958-972