Stem-loop gma-MIR5034

Accession

MI0017906

Description

Glycine max gma-MIR5034 precursor miRNA

Sequence

cgacacuguagaaacaguaaaaauugagucuauuuaaaggaguccucguucccuuugugaGGUACCCUUUCAGAUAGUCUCAaaaccagguuuuagagagagaagcucugccuaggaaaaacucuuuguaagcuucuaugcccauaucaau
.(((.(((((((..((((....))))..)))))....))..)))...........((((.((((.............(((((((((...))))).)))).(((((((.(((..((((.....)))).)))))))))).)))))))).....

Structure

cgacacuguagaaacaguaaaaauugagucuauuuaaaggaguccucguucccuu    a    --------------------------CCCUUUCAGAUAG    -     c 
                                                       ugug GGUA                                       UCUC Aaaac  
                                                       |||| ||||                                       |||| ||||| a
                                                       auac ccgu                                       agag uuuug  
--------------------------------------------------uaacu    -    aucuucgaauguuucucaaaaaggauccgucucgaagag    a     g 

Annotation confidence Not enough data

Genome context

chr6: 46560092-46560242 [+]

Mature gma-miR5034

• Accession: MIMAT0021055
• Description: Glycine max gma-miR5034 mature miRNA
• Sequence: 61 - GGUACCCUUUCAGAUAGUCUCA - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21751852
   Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome
   "Radwan O, Liu Y, Clough SJ"
   "Mol Plant Microbe Interact (2011) 24:958-972