Dead hairpin entry

Stem-loop gma-MIR5039

Accession

MI0017916

Description

Glycine max gma-MIR5039 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention gma-MIR5039
(1 sentences)

Sequence

2960 reads, 104.0 reads per million, 163 experiments

uuacacauucagguacaaaaaugacuauuuauccaaaauauaauuuaauauucauuuucuCCCUUUUUUAAUCGUUGCAUGcauaacauuacaauaaucacuuguaacgAUUAAAAAAAAGGAGAAAAgaugaagauuaaauuauauuuug
...........(((.((....))))).......((((((((((((((((.((((((((((((.((((((((((((((((.......................))))))))))))))))..))))))..)))))).))))))))))))))))

Structure

uuacacauucagguacaaaaaugacuauuuauc                a      --      -C                UGcauaacau 
                                 caaaauauaauuuaau uucauu  uucuCC  UUUUUUAAUCGUUGCA          u
                                 |||||||||||||||| ||||||  ||||||  ||||||||||||||||          a
                                 guuuuauauuaaauua aaguag  AAGAGG  AAAAAAUUAgcaaugu          c
---------------------------------                g      AA      AA                ucacuaauaa