miRBase entry: gma-MIR5040

Dead hairpin entry

Stem-loop gma-MIR5040


Accession
MI0017917
Description
Glycine max gma-MIR5040 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

25122 reads, 85.0 reads per million, 178 experiments
uaguuuggauaauaagcuuuuuagauaggaaacucaaugagaauauuacugauugaaggucAUGAUAUAUAACAAGCAUGAGgauauaaauguuauauacaaugUUGUUGUGUUUGGUUGAUAgugaaucuaaugaaccgggggaaugaaa
.((((((.....))))))..((((((.......(((((.((.......)).)))))...((((..(((....(((((((((.(((((...(((.....)))))))).)))))))))....)))))))))))))..................

Structure
uaguuuggauaauaagcuuu      aggaaacucaaugagaauauuacugauugaagg    GA   AUAA         G     aaa   u 
                    uuagau                                 ucAU  UAU    CAAGCAUGA gauau   ugu a
                    ||||||                                 ||||  |||    ||||||||| |||||   ||| u
                    aaucua                                 agug  AUA    GUUUGUGUU UUgua   aca a
--aaaguaagggggccaagu      ---------------------------------    --   GUUG         G     ---   u