Stem-loop gma-MIR4372b

Accession

MI0017923

Description

Glycine max gma-MIR4372b precursor miRNA

Sequence

3474 reads, 43.0 reads per million, 172 experiments

ucgucaugugucacaauuuuauuAGAGGUUGACGUUAAUUAagugcaucaaauuaacaucUAAUAAAAUCGUGACAUGUAACaaucaacguccaauaaaaacacaacacuugacggucaagauaaucaauuaacguccaauuuugagauua
((((((.((((.....(((((((.((.(((((.(((((((..........)))))))...........................))))).)).))))))).....)))).))))))(((((((................))))))).....

Structure

-----------------------------------      u    cacaa       A  G     --------------------------C       Aagu 
                                   ucguca gugu     uuuuauu GA GUUGA                           GUUAAUU    g
                                   |||||| ||||     ||||||| || |||||                           |||||||     
                                   ggcagu caca     aaaauaa cu caacu                           caauuaa    c
auuagaguuuuaaccugcaauuaacuaauagaacu      u    acaca       c  g     aaCAAUGUACAGUGCUAAAAUAAUcua       acua 

Annotation confidence Low

Genome context

chr18: 51223300-51223450 [+]

Mature gma-miR4372b-5p

• Accession: MIMAT0054217
• Description: Glycine max gma-miR4372b-5p mature miRNA
• Sequence: 24 - AGAGGUUGACGUUAAUUA - 41
• Evidence: experimental ; unknown

Mature gma-miR4372b-3p

• Accession: MIMAT0021073
• Description: Glycine max gma-miR4372b-3p mature miRNA
• Sequence: 61 - UAAUAAAAUCGUGACAUGUAAC - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21751852
   Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome
   "Radwan O, Liu Y, Clough SJ"
   "Mol Plant Microbe Interact (2011) 24:958-972