Stem-loop hme-mir-2788

Accession

MI0017927

Description

Heliconius melpomene hme-mir-2788 precursor miRNA

Literature search

1 open access papers mention hme-mir-2788
(12 sentences)

Sequence

gucgcuguauugcUGGGGUUUCCUAGCGGCAUGUGCcuucuucuaugCAAUGCCCUUGGAAAUCCCAAAcgugcuggcgac
((((((((((...((((((((((.((.(((((.(((..........)))))))))).))))))))))...)))).))))))

Structure

      -    ugc          U  C     G   cuuc 
gucgcu guau   UGGGGUUUCC AG GGCAU UGC    u
|||||| ||||   |||||||||| || ||||| |||     
cagcgg cgug   ACCCUAAAGG UC CCGUA ACg    u
      u    cAA          U  -     -   uauc 

Annotation confidence Not enough data

Genome context

HE667780: 843550-843630 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-2788

Mature hme-miR-2788-5p

• Accession: MIMAT0020536
• Description: Heliconius melpomene hme-miR-2788-5p mature miRNA
• Sequence: 14 - UGGGGUUUCCUAGCGGCAUGUGC - 36
• Evidence: experimental ; Illumina [1]

Mature hme-miR-2788-3p

• Accession: MIMAT0020537
• Description: Heliconius melpomene hme-miR-2788-3p mature miRNA
• Sequence: 48 - CAAUGCCCUUGGAAAUCCCAAA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21266089
   Characterisation and expression of microRNAs in developing wings of the neotropical butterfly Heliconius melpomene
   Surridge AK, Lopez-Gomollon S, Moxon S, Maroja LS, Rathjen T, Nadeau NJ, Dalmay T, Jiggins CD
   BMC Genomics (2011) 12:62