Stem-loop ssc-mir-219a

Accession

MI0017990

Description

Sus scrofa ssc-mir-219a precursor miRNA

Literature search

4 open access papers mention ssc-mir-219a
(6 sentences)

Sequence

2 reads, 1 reads per million, 2 experiments

ccgcggcucuugauuguccaaacgcaauucucgagucuauagcucuggccgAGAGUUGAGUCUGGACGUCCCGagccgucgcc
.((((((((..(((.(((((.((.(((((((((.(((.........)))))))))))).)).))))))))..)))))).))..

Structure

-c  -      uu   u     a  g         a   uau 
  cg cggcuc  gau gucca ac caauucucg guc   a
  || ||||||  ||| ||||| || ||||||||| |||   g
  gc gccgaG  CUG CAGGU UG GUUGAGAgc cgg   c
cc  u      CC   -     C  A         -   ucu 

Annotation confidence Not enough data

Genome context

chr7: 29752701-29752783 [-]

Mature ssc-miR-219a

• Accession: MIMAT0020590
• Description: Sus scrofa ssc-miR-219a mature miRNA
• Sequence: 52 - AGAGUUGAGUCUGGACGUCCCG - 73
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100