Stem-loop ssc-mir-491

Accession

MI0017993

Description

Sus scrofa ssc-mir-491 precursor miRNA

Literature search

6 open access papers mention ssc-mir-491
(9 sentences)

Sequence

23923 reads, 30.0 reads per million, 203 experiments

uuagcuggguAGUGGGGAACCCUUCCAUGAGGaguagaacacucCUUAUGCAAGAUUCCCUUCUACcugacugggu
((((.(((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).))))))).))))..

Structure

--    c       U      CC   C          a 
  uuag uggguAG GGGGAA  CUU CAUGAGGagu g
  |||| ||||||| ||||||  ||| |||||||||| a
  gguc gucCAUC UCCCUU  GAA GUAUUCcuca a
ug    a       U      -A   C          c 

Annotation confidence High

Genome context

chr1: 225810907-225810982 [-]

Mature ssc-miR-491-5p

• Accession: MIMAT0020592
• Description: Sus scrofa ssc-miR-491-5p mature miRNA
• Sequence: 11 - AGUGGGGAACCCUUCCAUGAGG - 32
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-491-3p

• Accession: MIMAT0052675
• Description: Sus scrofa ssc-miR-491-3p mature miRNA
• Sequence: 45 - CUUAUGCAAGAUUCCCUUCUAC - 66
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100