Stem-loop mmu-mir-5116

Accession

MI0018025

Symbol

MGI: Mir5116

Description

Mus musculus mmu-mir-5116 precursor miRNA

Literature search

2 open access papers mention mmu-mir-5116
(2 sentences)

Sequence

263 reads, 5.0 reads per million, 52 experiments

auUUUGAUAGGAACCCCGCCUGAugcuuuuugguuuguuucagGCAGGGUCUUCAUAUCGAGA
.(((((((((((((((.((((((.((..........)).)))))).)))).))).))))))))

Structure

a        -   -    C      u  uuuu 
 uUUUGAUA GGA ACCC GCCUGA gc    u
 |||||||| ||| |||| |||||| ||     
 AGAGCUAU CUU UGGG CGgacu ug    g
-        A   C    A      u  uuug 

Annotation confidence High

Genome context

X: 55633212-55633274 [-]

Mature mmu-miR-5116-5p

• Accession: MIMAT0020624
• Description: Mus musculus mmu-miR-5116-5p mature miRNA
• Sequence: 3 - UUUGAUAGGAACCCCGCCUGA - 23
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-5116-3p

• Accession: MIMAT0050735
• Description: Mus musculus mmu-miR-5116-3p mature miRNA
• Sequence: 44 - GCAGGGUCUUCAUAUCGAGA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21403133
   Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
   "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
   "Blood (2011) 117:5340-5349