Stem-loop mmu-mir-5130

Accession

MI0018042

Symbol

MGI: Mir5130

Description

Mus musculus mmu-mir-5130 precursor miRNA

Literature search

3 open access papers mention mmu-mir-5130
(7 sentences)

Sequence

98 reads, 1 reads per million, 37 experiments

cCUGGAGCGCGCGGGCGAGGCAGGCgcagcgcaccggggcucucgugggcgcacugcugcgcgcucgcaccgcgcggcucucag
.((((((((((((((((((.(..((((((((.....(.((((....)))).)..)))))))))))))).)))))).)))).)))

Structure

c   -    -      -     G AG        caccg g    u 
 CUG GAGC GCGCGG GCGAG C  GCgcagcg     g gcuc c
 ||| |||| |||||| ||||| |  ||||||||     | ||||  
 gac cucg cgcgcc cgcuc g  cgcgucgu     c cggg g
-   u    g      a     - --        ---ca g    u 

Annotation confidence Not enough data

Genome context

chr14: 102982549-102982632 [-]

Mature mmu-miR-5130

• Accession: MIMAT0020641
• Description: Mus musculus mmu-miR-5130 mature miRNA
• Sequence: 2 - CUGGAGCGCGCGGGCGAGGCAGGC - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21403133
   Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
   "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
   "Blood (2011) 117:5340-5349