Stem-loop osa-MIR5145

Accession

MI0018057

Description

Oryza sativa osa-MIR5145 precursor miRNA

Sequence

60 reads, 42 reads per million, 2 experiments

ccACCUGUUUGGAUUCUUGAGGGCUAauuuaaaauuaaaaugugagagcuaaacauuaguccauagaaccaaacagggccgc
...(((((((((.((((...((((((((..........................))))))))..))))))))))))).....

Structure

--ccA         A    UGA        uuaaaauuaaaa 
     CCUGUUUGG UUCU   GGGCUAau            u
     ||||||||| ||||   ||||||||             
     ggacaaacc aaga   ccugauua            g
cgccg         -    -ua        caaaucgagagu 

Annotation confidence Not enough data

Genome context

Chr1: 40622637-40622718 [-]

Mature osa-miR5145

• Accession: MIMAT0021090
• Description: Oryza sativa osa-miR5145 mature miRNA
• Sequence: 3 - ACCUGUUUGGAUUCUUGAGGGCUA - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547