Stem-loop osa-MIR5145

Accession

MI0018057

Description

Oryza sativa osa-MIR5145 precursor miRNA

Sequence

21211 reads, 74.0 reads per million, 140 experiments

ccACCUGUUUGGAUUCUUGAGGGCUAauuuaaaauuaaaaugugagagcuaaacauuaguccAUAGAACCAAACAGGGCCgc
...(((((((((.((((...((((((((..........................))))))))..))))))))))))).....

Structure

--ccA         A    UGA        uuaaaauuaaaa 
     CCUGUUUGG UUCU   GGGCUAau            u
     ||||||||| ||||   ||||||||             
     GGACAAACC AAGA   ccugauua            g
cgCCG         -    -UA        caaaucgagagu 

Annotation confidence Low

Genome context

1: 40622637-40622718 [-]

Mature osa-miR5145-5p

• Accession: MIMAT0021090
• Description: Oryza sativa osa-miR5145-5p mature miRNA
• Sequence: 3 - ACCUGUUUGGAUUCUUGAGGGCUA - 26
• Evidence: experimental ; Illumina [1]

Mature osa-miR5145-3p

• Accession: MIMAT0056178
• Description: Oryza sativa osa-miR5145-3p mature miRNA
• Sequence: 63 - AUAGAACCAAACAGGGCC - 80
• Evidence: experimental ; unknown

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547