Stem-loop osa-MIR5148a

Accession

MI0018061

Description

Oryza sativa osa-MIR5148a precursor miRNA

Sequence

46 reads, 32 reads per million, 2 experiments

cacgauaugacguuuguaccccucacaaguacaaauauaaugcaugucaaUGAGGGGUAGAAAUGUCAUAUCAUgu
...((((((((((((.(((((((((((.(((.........))).)))....)))))))).))))))))))))....

Structure

-cac            g        ----   a   caa 
    gauaugacguuu uaccccuc    aca gua   a
    |||||||||||| ||||||||    ||| |||   u
    CUAUACUGUAAA AUGGGGAG    ugu cgu   a
ugUA            G        Uaac   a   aau 

Annotation confidence Not enough data

Genome context

Chr3: 9968953-9969028 [-]

Mature osa-miR5148a

• Accession: MIMAT0021094
• Description: Oryza sativa osa-miR5148a mature miRNA
• Sequence: 51 - UGAGGGGUAGAAAUGUCAUAUCAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547