Stem-loop osa-MIR5148a

Accession

MI0018061

Description

Oryza sativa osa-MIR5148a precursor miRNA

Sequence

13170 reads, 49.0 reads per million, 140 experiments

cacgauAUGACGUUUGUACCCCUCACAAGUacaaauauaaugcaugucaaUGAGGGGUAGAAAUGUCAUAUCAUgu
...((((((((((((.(((((((((((.(((.........))).)))....)))))))).))))))))))))....

Structure

-cac            G        ----   A   caa 
    gauAUGACGUUU UACCCCUC    ACA GUa   a
    |||||||||||| ||||||||    ||| |||   u
    CUAUACUGUAAA AUGGGGAG    ugu cgu   a
ugUA            G        Uaac   a   aau 

Annotation confidence Low

Genome context

3: 9968953-9969028 [-]

Mature osa-miR5148a-5p

• Accession: MIMAT0056182
• Description: Oryza sativa osa-miR5148a-5p mature miRNA
• Sequence: 7 - AUGACGUUUGUACCCCUCACAAGU - 30
• Evidence: experimental ; unknown

Mature osa-miR5148a-3p

• Accession: MIMAT0021094
• Description: Oryza sativa osa-miR5148a-3p mature miRNA
• Sequence: 51 - UGAGGGGUAGAAAUGUCAUAUCAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547