Stem-loop osa-MIR5148b

Accession

MI0018062

Description

Oryza sativa osa-MIR5148b precursor miRNA

Sequence

12407 reads, 45.0 reads per million, 140 experiments

uacGAUAUGACGUUUGUACCCCUCACAaguauaaguauaauguaugucaaUGAGGGGUAGAAAUGUCAUAUCAUgugu
...((((((((((((.(((((((((...(((((.......))))).....))))))))).))))))))))))......

Structure

---uac            G         --CAa     ag 
      GAUAUGACGUUU UACCCCUCA     guaua  u
      |||||||||||| |||||||||     |||||  a
      CUAUACUGUAAA AUGGGGAGU     uaugu  u
ugugUA            G         aacug     aa 

Annotation confidence Medium

Genome context

6: 27436650-27436727 [+]

Mature osa-miR5148b-5p

• Accession: MIMAT0056183
• Description: Oryza sativa osa-miR5148b-5p mature miRNA
• Sequence: 4 - GAUAUGACGUUUGUACCCCUCACA - 27
• Evidence: experimental ; unknown

Mature osa-miR5148b-3p

• Accession: MIMAT0021095
• Description: Oryza sativa osa-miR5148b-3p mature miRNA
• Sequence: 51 - UGAGGGGUAGAAAUGUCAUAUCAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547