Stem-loop osa-MIR5159

Accession

MI0018075

Description

Oryza sativa osa-MIR5159 precursor miRNA

Literature search

1 open access papers mention osa-MIR5159
(1 sentences)

Sequence

3 reads, 3 reads per million, 2 experiments

uguaccuguugacugacucugguucaacaaaaccaauuuuacuuuuguugAACUAGAGUGGGUCAACGGGUACCca
.(((((((((((((.(((((((((((((((((..........))))))))))))))))).)))))))))))))...

Structure

--u             g                 ccaa 
   guaccuguugacu acucugguucaacaaaa    u
   ||||||||||||| |||||||||||||||||     
   CAUGGGCAACUGG UGAGAUCAAguuguuuu    u
acC             G                 cauu 

Annotation confidence Not enough data

Genome context

Chr11: 11920712-11920787 [+]

Mature osa-miR5159

• Accession: MIMAT0021112
• Description: Oryza sativa osa-miR5159 mature miRNA
• Sequence: 51 - AACUAGAGUGGGUCAACGGGUACC - 74
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547


2. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207