Accession
MI0018082
Description
Brachypodium distachyon
bdi-MIR169j precursor miRNA
Literature search
3 open access papers mention bdi-MIR169j
(27 sentences)
(27 sentences)
Sequence
cuuacauggagauaaggagccuaccucuguUAGCCAGGAAUGGCUUGCCUAcgcacacauuuuucgguucaucacaggggcaaaacuaacuuggagauagccccuaguaugauggacggaguguggcugcaUGGUCAAGCCUUCCUGACUAGGagagugcuccucaucccccaugcuaggcug
(((((((((.(((.((((((....((((.((((.((((((.((((((.(((.(((..(((..(((.(((((((((((((((..................)))))).))..))))))).))).)))..))).))).)))))))))))).)))).)))).)))))).)))..))))).))))...
(((((((((.(((.((((((....((((.((((.((((((.((((((.(((.(((..(((..(((.(((((((((((((((..................)))))).))..))))))).))).)))..))).))).)))))))))))).)))).)))).)))))).)))..))))).))))...
Structure
--- - -a a cuac g C U C c ca uu g -- - aaaacuaa cuua caugg gau aggagc cucu uUAG CAGGAA GGCUUG CUA gca cau uuc guucauc ac aggggc c |||| ||||| ||| |||||| |||| |||| |||||| |||||| ||| ||| ||| ||| ||||||| || |||||| ggau guacc cua uccucg gaga GAUC GUCCUU CCGAAC GGU cgu gug gag cagguag ug uccccg u guc c cc c ---u G A - U a cg -u g ua a auagaggu
Annotation confidence
Not enough data
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Genome context
4: 44513754-44513936 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR169j
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bdi-miR169j-5p
| Accession | MIMAT0020657 |
| Description | Brachypodium distachyon bdi-miR169j-5p mature miRNA |
| Sequence | 31 - UAGCCAGGAAUGGCUUGCCUA - 51 |
| Evidence |
experimental
Illumina [2] |
Mature bdi-miR169j-3p
| Accession | MIMAT0027042 |
| Description | Brachypodium distachyon bdi-miR169j-3p mature miRNA |
| Sequence | 132 - UGGUCAAGCCUUCCUGACUAGG - 153 |
| Evidence |
experimental
Illumina [2] |
References
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