Accession
MI0018129
Description
Brachypodium distachyon
bdi-MIR5163a precursor miRNA
Sequence
cagaggcucgucgauugcaaaucaugcgugcaucuuucuauuauugagcguaCCUAGCCUAAAAUAUUUAAAAauaauuggagcaacuaaaguuguuguuguucaauuacuuUUAGGUAUUUCAGGUUAGGUGgcuaaccaaugguggaaguugcacaccugauuugcgauuaucaacuuuaggau
.((((....(..((((((((((((.(.(((((..(((((((((((((((.((((((((((.((((((((((((.(((((((((((((.......)))))..)))))))).)))))))))))).)))))))))))))...)))))))))))).))))).).))))))))))))..)..)))).....
.((((....(..((((((((((((.(.(((((..(((((((((((((((.((((((((((.((((((((((((.(((((((((((((.......)))))..)))))))).)))))))))))).)))))))))))))...)))))))))))).))))).).))))))))))))..)..)))).....
Structure
----c gcuc uc u c uc --- g A a -- ua
agag g gauugcaaauca g gugca uuucuauuauug agc uaCCUAGCCU AAAUAUUUAAAA uaauugga gcaac a
|||| | |||||||||||| | ||||| |||||||||||| ||| |||||||||| |||||||||||| |||||||| ||||| a
uuuc c uuagcguuuagu c cacgu gaaggugguaac ucg GUGGAUUGGA UUUAUGGAUUuu auuaacuu uguug g
uagga --aa ua c a -u caa - C c gu uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
4: 11947824-11948009 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR5163a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bdi-miR5163a-3p
| Accession | MIMAT0020704 |
| Description | Brachypodium distachyon bdi-miR5163a-3p mature miRNA |
| Sequence | 113 - UUAGGUAUUUCAGGUUAGGUG - 133 |
| Evidence |
experimental
Illumina [2] |
Mature bdi-miR5163a-5p
| Accession | MIMAT0027076 |
| Description | Brachypodium distachyon bdi-miR5163a-5p mature miRNA |
| Sequence | 53 - CCUAGCCUAAAAUAUUUAAAA - 73 |
| Evidence |
experimental
Illumina [2] |
References
|
