Accession
MI0018155
Description
Brachypodium distachyon
bdi-MIR5182 precursor miRNA
Sequence
5331
reads,
54.0
reads per million, 21 experiments
aauaggcacccccuaagcauguauuaccUCCGUCCGGAUUUAUAAGGCAcguguguguuccaagaucaucgauguaacuagcaaaauaauucaaaaguucauuugacuacaaaucuaaugauguacuuuuuuguguaauauaauacauauuuuguugguuaaauUGAUGAUCUUGGAACACGUGCaugccuuauauauccguaccgagguacuac
..((((.....)))).....(((.((((((.((.(((((.(((((((((.(((((((((((((((((((((((.((((((((((((((....(((((((((((.((.......)).)))))...)))))).(((((......))))))))))))))))))).))))))))))))))))))))))).))))))))).))))).)).)))))).)))
..((((.....)))).....(((.((((((.((.(((((.(((((((((.(((((((((((((((((((((((.((((((((((((((....(((((((((((.((.......)).)))))...)))))).(((((......))))))))))))))))))).))))))))))))))))))))))).))))))))).))))).)).)))))).)))
Structure
aauaggcacccccuaagcau u C C U c g -------------auuc --- u cu
gua uaccUC GU CGGAU UAUAAGGCA guguguguuccaagaucaucgau uaacuagcaaaaua aaaagu ucauu ga a
||| |||||| || ||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||| || c
cau auggag ca gccua auauuccgu CGUGCACAAGGUUCUAGUAGUua auugguuguuuuau uuuuca aguaa cu a
-------------------- c c u u a a acauaauauaauguguu ugu u aa
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
2: 51090546-51090760 [-]
Database links
Mature bdi-miR5182-5p
| Accession | MIMAT0057017 |
| Description | Brachypodium distachyon bdi-miR5182-5p mature miRNA |
| Sequence | 29 - UCCGUCCGGAUUUAUAAGGCA - 49 |
| Evidence |
experimental
unknown |
Mature bdi-miR5182-3p
| Accession | MIMAT0020731 |
| Description | Brachypodium distachyon bdi-miR5182-3p mature miRNA |
| Sequence | 165 - UGAUGAUCUUGGAACACGUGC - 185 |
| Evidence | not_experimental |
References
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