Accession
MI0018157
Description
Brachypodium distachyon
bdi-MIR5184 precursor miRNA
Sequence
777
reads,
9.0
reads per million, 20 experiments
cucuaaaauuucucaaaaacagaaucauagaugcgcaucaUGUUAGAACACGUGCGCCUGCaaaacaaucaugcaaaaagaucaaaugggcccugccaaaaauguauaaacaauucuacuuuuauuuuuuauuagugaagcuagaaccacuuguuauuuuaguacauggcacauuugaucauauuuucaugacuguuugcaggugcauaugUUCUAACAUUAUGCACAUCUAUGuuuuuucugagaauuuuuuuacaugcaca
....((((.((((((.(((..(((.((((((((.((((.(((((((((((.(((((((((((((.((.(((((.((((.(((((((((.(((.((...((((((.((((....(((((.(((((((.......))))))).)))))....))))))))))....)).))).)))))))))...))))))))).))))))))))))))).))))))))))).)))).)))))))))))))).)))))).))))...........
....((((.((((((.(((..(((.((((((((.((((.(((((((((((.(((((((((((((.((.(((((.((((.(((((((((.(((.((...((((((.((((....(((((.(((((((.......))))))).)))))....))))))))))....)).))).)))))))))...))))))))).))))))))))))))).))))))))))).)))).)))))))))))))).)))))).))))...........
Structure
-------cucu u a ca u c c C a a c --a g c -cca u acaa c uu
aaaa uucuca aaa gaa cauagaug gcau aUGUUAGAACA GUGCGCCUGCaaa ca ucaug aaaa gaucaaaug gcc ug aaaaug auaa uucua uuuuauu u
|||| |||||| ||| ||| |||||||| |||| ||||||||||| ||||||||||||| || ||||| |||| ||||||||| ||| || |||||| |||| ||||| ||||||| u
uuuu aagagu uuu uuu GUAUCUAC CGUA UACAAUCUUgu uacguggacguuu gu aguac uuuu cuaguuuac cgg ac uuuuau uguu aagau gaaguga a
acacguacauu u c -- - A U a - c - aua a u auga - cacc c uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
2: 47213136-47213398 [-]
Database links
Mature bdi-miR5184-5p
| Accession | MIMAT0057019 |
| Description | Brachypodium distachyon bdi-miR5184-5p mature miRNA |
| Sequence | 41 - UGUUAGAACACGUGCGCCUGC - 61 |
| Evidence |
experimental
unknown |
Mature bdi-miR5184-3p
| Accession | MIMAT0020733 |
| Description | Brachypodium distachyon bdi-miR5184-3p mature miRNA |
| Sequence | 212 - UUCUAACAUUAUGCACAUCUAUG - 234 |
| Evidence | not_experimental |
References
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