Stem-loop bpcv1-mir-B1

Accession

MI0018178

Description

Bandicoot papillomatosis carcinomatosis virus type 1 bpcv1-mir-B1 precursor miRNA

Sequence

aucgcaugggaacucucaggcuuaguacuuuauaaaccgaaaguauAAUACUGUGCUUGAGAGUGCGCggu
(((((......((((((((((.(((((((((........))))).....)))).))))))))))..)))))

Structure

     auggga          u    -----     aua 
aucgc      acucucaggc uagu     acuuu   a
|||||      |||||||||| ||||     |||||    
uggCG      UGAGAGUUCG GUCA     ugaaa   a
     ----CG          U    UAAua     gcc 

Annotation confidence Not enough data

Genome context

Unknown

Mature bpcv1-miR-B1

• Accession: MIMAT0020276
• Description: Bandicoot papillomatosis carcinomatosis virus type 1 bpcv1-miR-B1 mature miRNA
• Sequence: 47 - AAUACUGUGCUUGAGAGUGCGC - 68
• Evidence: experimental ; Northern [1], SOLID [1]

References

1. PubMed ID: 21345962
   Insights into Polyomaviridae microRNA function derived from study of the bandicoot papillomatosis carcinomatosis viruses
   "Chen CJ, Kincaid RP, Seo GJ, Bennett MD, Sullivan CS"
   "J Virol (2011) 85:4487-4500