Stem-loop ssp-MIR396

Accession

MI0018195

Description

Saccharum sp. ssp-MIR396 precursor miRNA

Literature search

1 open access papers mention ssp-MIR396
(1 sentences)

Sequence

UUCCACAGCUUUCUUGAACUGcaucucuaagaggagcagcucgaagccucgaacucuaccugcaugagcaggugcaguucaauaaagcuguggga
((((((((((((.(((((((((((((((...(((((.((.((((....)))).)))).))).....)).))))))))))))).))))))))))))

Structure

            C             -  --aag   -  c  c    a 
UUCCACAGCUUU UUGAACUGcaucu cu     agg ag ag ucga g
|||||||||||| ||||||||||||| ||     ||| || || ||||  
agggugucgaaa aacuugacgugga ga     ucc uc uc agcu c
            u             c  guacg   a  -  a    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssp-miR396

• Accession: MIMAT0020295
• Description: Saccharum sp. ssp-miR396 mature miRNA
• Sequence: 1 - UUCCACAGCUUUCUUGAACUG - 21
• Evidence: not_experimental

References

1. PubMed ID: 21092324
   Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
   Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
   BMC Plant Biol (2010) 10:260