Stem-loop mtr-MIR5245

Accession

MI0018346

Description

Medicago truncatula mtr-MIR5245 precursor miRNA

Sequence

agaaggaucgaCAUCGUAGAACACAGGCAGUAcaaccuggccugugguucugugacgcaccauuauuugc
....((..((...(((((((((((((((((......)).)))))).)))))))))))..)).........

Structure

-----agaa  au  aCA         -      -  UA 
         gg  cg   UCGUAGAAC ACAGGC AG  c
         ||  ||   ||||||||| |||||| ||   
         cc  gc   agugucuug uguccg uc  a
cguuuauua  ac  ---         g      g  ca 

Annotation confidence Not enough data

Genome context

chr4: 3454832-3454901 [+]

Mature mtr-miR5245

• Accession: MIMAT0021241
• Description: Medicago truncatula mtr-miR5245 mature miRNA
• Sequence: 12 - CAUCGUAGAACACAGGCAGUA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010