Stem-loop mtr-MIR5272b

Accession

MI0018406

Description

Medicago truncatula mtr-MIR5272b precursor miRNA

Sequence

ugaguugaauguGAAUUGAUUUAUGUUUGGAUACACucaauuaaaacugauuuuuauuaguugauauuguuuggauaguuugaaucaaaauugauuuuaaa
............((((((((((..((((((((.((..((((...(((((((....)))))))...))))..))....))))))))..))))))))))....

Structure

ugaguugaaugu          AU        ---A  Cu    uaa       u 
            GAAUUGAUUU  GUUUGGAU    CA  caau   aacugau u
            ||||||||||  ||||||||    ||  ||||   |||||||  
            uuuaguuaaa  uaaguuug    gu  guua   uugauua u
--------aaau          ac        auag  uu    uag       u 

Annotation confidence Not enough data

Genome context

chr5: 34748633-34748733 [-]

Mature mtr-miR5272b

• Accession: MIMAT0021303
• Description: Medicago truncatula mtr-miR5272b mature miRNA
• Sequence: 13 - GAAUUGAUUUAUGUUUGGAUACAC - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010