Stem-loop mtr-MIR5281b

Accession

MI0018424

Description

Medicago truncatula mtr-MIR5281b precursor miRNA

Sequence

uuuucuguaauacuaccuccgguccuauuuauaagagaaauuuagaucaacauaagugaauguauuuggacugaauuuuuaacuagauacaucaacuuuuguugacccaaaauucUCUUAUAAAUAGGACCGGAGGGAGuacuuggaaucac
..(((((...((((.((((((((((((((((((((((((.(((.(.((((((.((((..((((((((((.............))))))))))..)))).)))))).).))).)))))))))))))))))))))))).))))..)))))....

Structure

--uu     uaa    a                        a   a a      u    ga          acuga 
    uucug   uacu ccuccgguccuauuuauaagagaa uuu g ucaaca aagu  auguauuugg     a
    |||||   |||| |||||||||||||||||||||||| ||| | |||||| ||||  ||||||||||     u
    aaggu   auGA GGAGGCCAGGAUAAAUAUUCUcuu aaa c aguugu uuca  uacauagauc     u
cacu     -uc    G                        a   c c      u    ac          aauuu 

Annotation confidence Not enough data

Genome context

chr8: 21790635-21790786 [-]

Mature mtr-miR5281b

• Accession: MIMAT0021321
• Description: Medicago truncatula mtr-miR5281b mature miRNA
• Sequence: 116 - UCUUAUAAAUAGGACCGGAGGGAG - 139
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010