Stem-loop mtr-MIR5288

Accession

MI0018452

Description

Medicago truncatula mtr-MIR5288 precursor miRNA

Sequence

uuggaagggugucccuaaauuucuucgccguguugauaCAGCAUUGAAGAACAUAGGGAUUAacgaacgug
..(...(...(((((((...(((((((..((((((...)))))))))))))..)))))))...)...)...

Structure

-uu gaa ggu       aau       cc      a 
   g   g   gucccua   uucuucg  guguug  
   |   |   |||||||   |||||||  |||||| u
   c   c   UAGGGAU   AAGAAGU  UACGAC  
gug aag aAU       -AC       --      a 

Annotation confidence Not enough data

Genome context

chr2: 23588271-23588341 [+]

Mature mtr-miR5288

• Accession: MIMAT0021349
• Description: Medicago truncatula mtr-miR5288 mature miRNA
• Sequence: 39 - CAGCAUUGAAGAACAUAGGGAUUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010