Stem-loop rmi-mir-5327

Accession

MI0018509

Description

Rhipicephalus microplus rmi-mir-5327 precursor miRNA

Sequence

gagcgucauaaaaaacgaauugAAAUGGUUCGUGAGGCUGCCaaaaaaacaagaacgaguaaugggauuuuagcagacuuacaaggaccaaaaauucguauaucaaguuuuaagc
..............(((((((....(((((((((((.((((.((((...((...........))...)))).)))).)))))..))))))..)))))))................

Structure

--gagcgucauaaaaa       gAAA      --     G    C    aaa  agaa 
                acgaauu    UGGUUC  GUGAG CUGC aaaa   ca    c
                |||||||    ||||||  ||||| |||| ||||   ||    g
                ugcuuaa    accagg  cauuc gacg uuuu   gu    a
cgaauuuugaacuaua       --aa      aa     a    a    agg  aaug 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5327

• Accession: MIMAT0021400
• Description: Rhipicephalus microplus rmi-miR-5327 mature miRNA
• Sequence: 23 - AAAUGGUUCGUGAGGCUGCC - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328