miRBase entry: 21699734

Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus

PubMed ID 21699734
Authors Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
Journal BMC Genomics
Volume 12
Pages 328

There are 107 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
isc-mir-5305 MI0018484 None DS696092 157384 157487 + -
isc-mir-5306 MI0018485 None DS717196 247001 247110 + -
isc-mir-5307 MI0018486 None DS942119 46308 46417 - -
isc-mir-5308 MI0018487 None DS911923 134615 134719 - -
isc-mir-5309 MI0018488 None DS745599 24786 24895 - -
isc-mir-3931 MI0018489 None DS763086 296440 296544 - -
isc-mir-5310 MI0018490 None DS649088 485358 485467 - -
isc-mir-5311 MI0018491 None DS708614 70265 70374 - -
isc-mir-5312 MI0018492 None DS900645 19149 19254 + -
isc-mir-5313 MI0018493 None DS968311 1340 1449 - -
isc-mir-5314 MI0018494 None DS954809 999151 999253 - -
isc-mir-5315 MI0018495 None DS734036 1283486 1283588 + -
rmi-mir-5316a MI0018496 None None None -
rmi-mir-5316b MI0018497 None None None -
rmi-mir-5317a MI0018498 None None None -
rmi-mir-5318 MI0018499 None None None -
rmi-mir-5317b MI0018500 None None None -
rmi-mir-5319 MI0018501 None None None -
rmi-mir-5320 MI0018502 None None None -
rmi-mir-5321 MI0018503 None None None -
rmi-mir-5322 MI0018504 None None None -
rmi-mir-5323 MI0018505 None None None -
rmi-mir-5324 MI0018506 None None None -
rmi-mir-5325 MI0018507 None None None -
rmi-mir-5326 MI0018508 None None None -
rmi-mir-5327 MI0018509 None None None -
rmi-mir-5328 MI0018510 None None None -
rmi-mir-5329 MI0018511 None None None -
rmi-mir-5330 MI0018512 None None None -
rmi-mir-5331 MI0018513 None None None -
rmi-mir-5332 MI0018514 None None None -
rmi-mir-5333 MI0018515 None None None -
rmi-mir-5334 MI0018516 None None None -
rmi-mir-5335 MI0018517 None None None -
rmi-mir-5336 MI0018518 None None None -
rmi-mir-5341 MI0018523 None None None -
bta-let-7f-2 MI0004734 15341 chrX 97466644 97466726 - High
bta-mir-125a MI0004752 2184 chr18 58267247 58267332 + High
bta-mir-125b-1 MI0004753 1129 chr15 33484663 33484750 - High
bta-mir-10a MI0005007 29380 chr19 38713901 38714009 + High
bta-mir-92a-2 MI0005024 4598 chrX 18021187 18021254 - -
bta-let-7d MI0005026 807 chr8 87366413 87366499 + High
bta-mir-124a-1 MI0005027 13 chr8 9221497 9221581 + -
bta-let-7g MI0005051 2040 chr22 49372363 49372445 + High
bta-mir-10b MI0005052 37824 chr2 20876466 20876564 - -
bta-mir-7-3 MI0005056 93 chr7 20670457 20670538 - -
bta-let-7a-1 MI0005057 11865 chr8 87363854 87363933 + High
bta-let-7f-1 MI0005062 15133 chr8 87364207 87364293 + High
bta-let-7i MI0005065 3806 chr5 51387456 51387539 - High
bta-let-7a-2 MI0005451 11827 chr15 33533448 33533519 - -
bta-let-7a-3 MI0005452 11878 chr5 117457806 117457879 + High
bta-let-7b MI0005453 4232 chr5 117458606 117458686 + High
bta-let-7c MI0005454 1399 chr1 19984844 19984927 - High
bta-let-7e MI0005455 535 chr18 58266748 58266826 + High
bta-mir-125b-2 MI0005457 1232 chr1 19935732 19935816 - High
bta-mir-1-2 MI0009718 574 chr24 34928847 34928931 + -
bta-mir-1-1 MI0009719 574 chr13 55456488 55456563 - -
bta-mir-100 MI0009720 673 chr15 33539274 33539349 - High
bta-mir-124a-2 MI0009725 13 chr14 31015073 31015183 + -
bta-mir-124b MI0009726 13 chr13 55046824 55046910 - -
bta-mir-133a-2 MI0009732 327 chr24 34932166 34932252 + High
bta-mir-133a-1 MI0009733 326 chr13 55446236 55446330 - High
bta-mir-133b MI0009734 15 chr23 24357763 24357846 + -
bta-mir-137 MI0009740 9 chr3 45682235 45682336 + -
bta-mir-153-1 MI0009749 14 chr2 108346811 108346900 - -
bta-mir-153-2 MI0009750 16 chr4 119976209 119976295 - -
bta-mir-190a MI0009762 22 chr10 47479144 47479228 - High
bta-mir-190b MI0009763 5 chr3 16531292 16531370 + -
bta-mir-219-1 MI0009781 3 chr11 99257286 99257381 - -
bta-mir-33a MI0009807 65 chr5 113746881 113746949 + High
bta-mir-33b MI0009808 45 chr19 35416499 35416592 + -
bta-mir-92a-1 MI0009905 5255 chr12 66421937 66422014 + -
bta-mir-92b MI0009906 396 chr3 15638041 15638136 - -
bta-mir-96 MI0009911 130 chr4 94724422 94724524 - -
isc-mir-2001 MI0010250 None DS758004 38911 38988 - -
bta-mir-7-2 MI0010462 181 chr8 79020781 79020889 - High
bta-mir-7-1 MI0010471 99 chr21 20048987 20049084 + -
isc-bantam MI0012259 None DS612599 38772 38872 - -
isc-let-7 MI0012260 None None None -
isc-mir-1 MI0012261 None DS811420 416289 416380 + -
isc-mir-10 MI0012262 None None None -
isc-mir-100 MI0012263 None DS978597 252465 252565 - -
isc-mir-12 MI0012264 None DS942119 45739 45839 - -
isc-mir-124 MI0012265 None DS840700 85144 85244 + -
isc-mir-133 MI0012266 None None None -
isc-mir-137 MI0012267 None None None -
isc-mir-153 MI0012268 None None None -
isc-mir-219 MI0012270 None DS658596 21107 21207 - -
isc-mir-252b MI0012271 None None None -
isc-mir-263a MI0012272 None DS633978 93542 93641 + -
isc-mir-275 MI0012273 None DS945001 243239 243339 - -
isc-mir-279 MI0012274 None None None -
isc-mir-285 MI0012275 None None None -
isc-mir-315 MI0012278 None DS711462 57333 57433 + -
isc-mir-317 MI0012279 None DS891538 57423 57523 - -
isc-mir-307 MI0012281 None DS911299 1700291 1700391 - -
isc-mir-7 MI0012282 None DS629750 8358 8437 - -
isc-mir-71 MI0012283 None DS799611 45689 45789 - -
isc-mir-79 MI0012285 None DS885551 436490 436590 + -
isc-mir-8 MI0012286 None DS755496 12152 12245 - -
isc-mir-87 MI0012287 None DS929532 41471 41571 - -
isc-mir-96 MI0012288 None DS633978 113205 113305 + -
isc-mir-993 MI0012289 None DS891538 3285820 3285911 - -
isc-mir-305 MI0016444 None DS945001 228261 228350 - -
bta-mir-133c MI0025193 None chr13 55446233 55446326 + -
bta-mir-219-2 MI0025539 13 None None -
bta-mir-219b MI0032929 20 chr11 99257288 99257375 + -



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